Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Mir1905-201ENSMUST00000122779 82 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 Gm25492-201ENSMUST00000157383 129 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Lbx1P52955 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.54□□□□□ -0.56
Lbx1P52955 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 Gm43811-201ENSMUST00000202862 695 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 Gm8268-201ENSMUST00000209683 458 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lbx1P52955 Gm18041-201ENSMUST00000218210 618 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 AC154433.1-201ENSMUST00000224401 1183 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lbx1P52955 Gm5449-201ENSMUST00000081132 357 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 Gm23105-201ENSMUST00000083719 134 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lbx1P52955 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lbx1P52955 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lbx1P52955 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Lbx1P52955 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lbx1P52955 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Lbx1P52955 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lbx1P52955 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lbx1P52955 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lbx1P52955 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Lbx1P52955 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lbx1P52955 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Lbx1P52955 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.54□□□□□ -0.56
Lbx1P52955 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.54□□□□□ -0.56
Lbx1P52955 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lbx1P52955 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.53□□□□□ -0.56
Lbx1P52955 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Lbx1P52955 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Lbx1P52955 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Lbx1P52955 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
Lbx1P52955 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.53□□□□□ -0.56
Lbx1P52955 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.53□□□□□ -0.56
Lbx1P52955 Ighv5-1-201ENSMUST00000193324 353 ntBASIC11.53□□□□□ -0.56
Lbx1P52955 Gm44958-201ENSMUST00000203734 736 ntBASIC11.53□□□□□ -0.56
Lbx1P52955 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Lbx1P52955 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.53□□□□□ -0.56
Lbx1P52955 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Lbx1P52955 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Mir341-201ENSMUST00000093593 96 ntBASIC11.53□□□□□ -0.56
Lbx1P52955 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Lbx1P52955 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lbx1P52955 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.53□□□□□ -0.56
Lbx1P52955 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Lbx1P52955 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lbx1P52955 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Lbx1P52955 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lbx1P52955 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lbx1P52955 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lbx1P52955 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
Lbx1P52955 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Lbx1P52955 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lbx1P52955 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lbx1P52955 AC158777.1-201ENSMUST00000226216 1724 ntBASIC11.52□□□□□ -0.56
Lbx1P52955 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Lbx1P52955 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lbx1P52955 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lbx1P52955 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lbx1P52955 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lbx1P52955 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Lbx1P52955 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lbx1P52955 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Lbx1P52955 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lbx1P52955 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lbx1P52955 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lbx1P52955 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lbx1P52955 Gm8019-201ENSMUST00000119317 587 ntBASIC11.52□□□□□ -0.57
Lbx1P52955 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lbx1P52955 Gm12009-201ENSMUST00000121361 1100 ntBASIC11.52□□□□□ -0.57
Lbx1P52955 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lbx1P52955 Gm16441-201ENSMUST00000138176 924 ntBASIC11.52□□□□□ -0.57
Lbx1P52955 Gm26174-201ENSMUST00000158415 219 ntBASIC11.52□□□□□ -0.57
Lbx1P52955 Gm16030-201ENSMUST00000159098 603 ntBASIC11.52□□□□□ -0.57
Lbx1P52955 Gm24328-201ENSMUST00000175104 67 ntBASIC11.52□□□□□ -0.57
Lbx1P52955 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lbx1P52955 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lbx1P52955 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.52□□□□□ -0.57
Lbx1P52955 Gm8574-201ENSMUST00000203207 924 ntBASIC11.52□□□□□ -0.57
Lbx1P52955 Gm39288-201ENSMUST00000210554 446 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms