Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Shmt1P50431 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Shmt1P50431 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Gm24891-201ENSMUST00000104391 136 ntBASIC12.53□□□□□ -0.4
Shmt1P50431 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Gm12579-201ENSMUST00000118040 783 ntBASIC12.53□□□□□ -0.4
Shmt1P50431 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.53□□□□□ -0.4
Shmt1P50431 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.53□□□□□ -0.4
Shmt1P50431 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.53□□□□□ -0.4
Shmt1P50431 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.53□□□□□ -0.4
Shmt1P50431 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.53□□□□□ -0.4
Shmt1P50431 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Shmt1P50431 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Shmt1P50431 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Shmt1P50431 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.53□□□□□ -0.4
Shmt1P50431 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.53□□□□□ -0.4
Shmt1P50431 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shmt1P50431 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Shmt1P50431 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Shmt1P50431 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.52□□□□□ -0.4
Shmt1P50431 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shmt1P50431 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Shmt1P50431 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.52□□□□□ -0.4
Shmt1P50431 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Shmt1P50431 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Shmt1P50431 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Shmt1P50431 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.52□□□□□ -0.41
Shmt1P50431 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.52□□□□□ -0.41
Shmt1P50431 Gm9550-201ENSMUST00000161130 862 ntBASIC12.52□□□□□ -0.41
Shmt1P50431 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.52□□□□□ -0.41
Shmt1P50431 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Shmt1P50431 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.52□□□□□ -0.41
Shmt1P50431 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Shmt1P50431 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.52□□□□□ -0.41
Shmt1P50431 Gm5714-201ENSMUST00000197343 566 ntBASIC12.52□□□□□ -0.41
Shmt1P50431 Gm6450-201ENSMUST00000200896 574 ntBASIC12.52□□□□□ -0.41
Shmt1P50431 Gm44487-201ENSMUST00000205145 325 ntBASIC12.52□□□□□ -0.41
Shmt1P50431 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.52□□□□□ -0.41
Shmt1P50431 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.52□□□□□ -0.41
Shmt1P50431 Gm2553-201ENSMUST00000215986 605 ntBASIC12.52□□□□□ -0.41
Shmt1P50431 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.52□□□□□ -0.41
Shmt1P50431 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.52□□□□□ -0.41
Shmt1P50431 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Shmt1P50431 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.52□□□□□ -0.41
Shmt1P50431 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Shmt1P50431 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.52□□□□□ -0.41
Shmt1P50431 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shmt1P50431 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.51□□□□□ -0.41
Shmt1P50431 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.51□□□□□ -0.41
Shmt1P50431 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Gm13809-201ENSMUST00000117921 597 ntBASIC12.51□□□□□ -0.41
Shmt1P50431 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.51□□□□□ -0.41
Shmt1P50431 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.51□□□□□ -0.41
Shmt1P50431 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms