Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.08□□□□□ -0.16
LtbrP50284 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.08□□□□□ -0.16
LtbrP50284 Gm44975-201ENSMUST00000207435 1390 ntBASIC14.08□□□□□ -0.16
LtbrP50284 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LtbrP50284 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LtbrP50284 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LtbrP50284 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LtbrP50284 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LtbrP50284 Gm11663-201ENSMUST00000117888 290 ntBASIC14.07□□□□□ -0.16
LtbrP50284 Gm16420-201ENSMUST00000120258 856 ntBASIC14.07□□□□□ -0.16
LtbrP50284 Gm16112-201ENSMUST00000159075 382 ntBASIC14.07□□□□□ -0.16
LtbrP50284 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.07□□□□□ -0.16
LtbrP50284 Gm4654-201ENSMUST00000183305 982 ntBASIC14.07□□□□□ -0.16
LtbrP50284 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Gm38247-201ENSMUST00000194675 433 ntBASIC14.07□□□□□ -0.16
LtbrP50284 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.07□□□□□ -0.16
LtbrP50284 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.07□□□□□ -0.16
LtbrP50284 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.07□□□□□ -0.16
LtbrP50284 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.07□□□□□ -0.16
LtbrP50284 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC14.07□□□□□ -0.16
LtbrP50284 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC14.07□□□□□ -0.16
LtbrP50284 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LtbrP50284 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
LtbrP50284 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LtbrP50284 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LtbrP50284 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Gm18829-201ENSMUST00000188150 1622 ntBASIC14.07□□□□□ -0.16
LtbrP50284 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LtbrP50284 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LtbrP50284 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.07□□□□□ -0.16
LtbrP50284 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.07□□□□□ -0.16
LtbrP50284 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LtbrP50284 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Gm15784-201ENSMUST00000120260 1462 ntBASIC14.06□□□□□ -0.16
LtbrP50284 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LtbrP50284 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
LtbrP50284 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Gm26286-201ENSMUST00000104166 134 ntBASIC14.06□□□□□ -0.16
LtbrP50284 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.06□□□□□ -0.16
LtbrP50284 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC14.06□□□□□ -0.16
LtbrP50284 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14.06□□□□□ -0.16
LtbrP50284 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC14.06□□□□□ -0.16
LtbrP50284 Rprl1-201ENSMUST00000158050 327 ntBASIC14.06□□□□□ -0.16
LtbrP50284 Gm15744-201ENSMUST00000161734 213 ntBASIC14.06□□□□□ -0.16
LtbrP50284 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LtbrP50284 Gm21092-201ENSMUST00000178995 955 ntBASIC14.06□□□□□ -0.16
LtbrP50284 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.06□□□□□ -0.16
LtbrP50284 Gm38313-201ENSMUST00000191953 1266 ntBASIC14.06□□□□□ -0.16
LtbrP50284 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC14.06□□□□□ -0.16
LtbrP50284 Gm45500-201ENSMUST00000211676 803 ntBASIC14.06□□□□□ -0.16
LtbrP50284 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.06□□□□□ -0.16
LtbrP50284 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.06□□□□□ -0.16
LtbrP50284 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.06□□□□□ -0.16
LtbrP50284 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LtbrP50284 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC14.06□□□□□ -0.16
LtbrP50284 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.06□□□□□ -0.16
LtbrP50284 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
LtbrP50284 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.06□□□□□ -0.16
LtbrP50284 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LtbrP50284 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LtbrP50284 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LtbrP50284 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms