Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nkx2-2P42586 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Gm15808-201ENSMUST00000119046 604 ntBASIC10.86□□□□□ -0.67
Nkx2-2P42586 Gm14017-201ENSMUST00000121934 386 ntBASIC10.86□□□□□ -0.67
Nkx2-2P42586 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.86□□□□□ -0.67
Nkx2-2P42586 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.86□□□□□ -0.67
Nkx2-2P42586 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.86□□□□□ -0.67
Nkx2-2P42586 Gm18212-201ENSMUST00000211678 889 ntBASIC10.86□□□□□ -0.67
Nkx2-2P42586 Gm9257-201ENSMUST00000221254 232 ntBASIC10.86□□□□□ -0.67
Nkx2-2P42586 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-2P42586 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Gm14208-201ENSMUST00000119645 678 ntBASIC10.85□□□□□ -0.67
Nkx2-2P42586 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Nkx2-2P42586 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Rps4l-202ENSMUST00000204242 789 ntBASIC10.85□□□□□ -0.67
Nkx2-2P42586 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
Nkx2-2P42586 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.85□□□□□ -0.67
Nkx2-2P42586 Gm18730-201ENSMUST00000218038 343 ntBASIC10.85□□□□□ -0.67
Nkx2-2P42586 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx2-2P42586 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.85□□□□□ -0.67
Nkx2-2P42586 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.85□□□□□ -0.67
Nkx2-2P42586 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-2P42586 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx2-2P42586 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Gm2260-201ENSMUST00000184965 657 ntBASIC10.84□□□□□ -0.67
Nkx2-2P42586 Gm28686-201ENSMUST00000187404 609 ntBASIC10.84□□□□□ -0.67
Nkx2-2P42586 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx2-2P42586 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.84□□□□□ -0.67
Nkx2-2P42586 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.84□□□□□ -0.67
Nkx2-2P42586 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-2P42586 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms