Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
TfamP40630 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
TfamP40630 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
TfamP40630 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TfamP40630 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.48□□□□□ -0.57
TfamP40630 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TfamP40630 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TfamP40630 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
TfamP40630 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TfamP40630 Gm14644-201ENSMUST00000116671 647 ntBASIC11.48□□□□□ -0.57
TfamP40630 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.48□□□□□ -0.57
TfamP40630 Gm15547-201ENSMUST00000122152 333 ntBASIC11.48□□□□□ -0.57
TfamP40630 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TfamP40630 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
TfamP40630 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.48□□□□□ -0.57
TfamP40630 Mir7085-201ENSMUST00000184353 66 ntBASIC11.48□□□□□ -0.57
TfamP40630 Gm18893-201ENSMUST00000198416 943 ntBASIC11.48□□□□□ -0.57
TfamP40630 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.48□□□□□ -0.57
TfamP40630 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TfamP40630 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TfamP40630 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TfamP40630 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.48□□□□□ -0.57
TfamP40630 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
TfamP40630 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TfamP40630 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TfamP40630 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TfamP40630 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.47□□□□□ -0.57
TfamP40630 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.47□□□□□ -0.57
TfamP40630 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.47□□□□□ -0.57
TfamP40630 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.47□□□□□ -0.57
TfamP40630 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.47□□□□□ -0.57
TfamP40630 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Gm11989-201ENSMUST00000117240 672 ntBASIC11.47□□□□□ -0.57
TfamP40630 Gm11362-201ENSMUST00000118838 850 ntBASIC11.47□□□□□ -0.57
TfamP40630 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.47□□□□□ -0.57
TfamP40630 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.47□□□□□ -0.57
TfamP40630 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TfamP40630 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.47□□□□□ -0.57
TfamP40630 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Gm27501-201ENSMUST00000183599 107 ntBASIC11.47□□□□□ -0.57
TfamP40630 Gm9230-201ENSMUST00000188228 532 ntBASIC11.47□□□□□ -0.57
TfamP40630 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.47□□□□□ -0.57
TfamP40630 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TfamP40630 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
TfamP40630 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TfamP40630 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.46□□□□□ -0.57
TfamP40630 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TfamP40630 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TfamP40630 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms