Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.96□□□□□ -0.65
Sftpa1P35242 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
Sftpa1P35242 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sftpa1P35242 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Gm7541-201ENSMUST00000118361 535 ntBASIC10.96□□□□□ -0.65
Sftpa1P35242 Gm13117-201ENSMUST00000120894 691 ntBASIC10.96□□□□□ -0.65
Sftpa1P35242 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.96□□□□□ -0.65
Sftpa1P35242 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.96□□□□□ -0.65
Sftpa1P35242 Gm9135-201ENSMUST00000182963 990 ntBASIC10.96□□□□□ -0.65
Sftpa1P35242 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sftpa1P35242 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.96□□□□□ -0.65
Sftpa1P35242 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sftpa1P35242 Gm17931-201ENSMUST00000208132 634 ntBASIC10.96□□□□□ -0.65
Sftpa1P35242 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sftpa1P35242 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.96□□□□□ -0.66
Sftpa1P35242 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.96□□□□□ -0.66
Sftpa1P35242 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.96□□□□□ -0.66
Sftpa1P35242 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.96□□□□□ -0.66
Sftpa1P35242 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.96□□□□□ -0.66
Sftpa1P35242 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sftpa1P35242 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Sftpa1P35242 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm14807-201ENSMUST00000116640 983 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm15036-201ENSMUST00000118880 400 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm11783-201ENSMUST00000119549 885 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm15610-201ENSMUST00000120584 195 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Sftpa1P35242 Ighv2-1-201ENSMUST00000170946 353 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.95□□□□□ -0.66
Sftpa1P35242 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm26989-201ENSMUST00000182608 749 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm16380-201ENSMUST00000077997 478 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm5451-201ENSMUST00000080545 579 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm23105-201ENSMUST00000083719 134 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Sftpa1P35242 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sftpa1P35242 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.95□□□□□ -0.66
Sftpa1P35242 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sftpa1P35242 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Sftpa1P35242 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sftpa1P35242 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.95□□□□□ -0.66
Sftpa1P35242 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.95□□□□□ -0.66
Sftpa1P35242 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms