Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.37□□□□□ -0.91
Rom1P32958 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Rom1P32958 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.36□□□□□ -0.91
Rom1P32958 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.36□□□□□ -0.91
Rom1P32958 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.36□□□□□ -0.91
Rom1P32958 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Rom1P32958 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.36□□□□□ -0.91
Rom1P32958 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.36□□□□□ -0.91
Rom1P32958 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Rom1P32958 Gm24196-201ENSMUST00000179161 110 ntBASIC9.36□□□□□ -0.91
Rom1P32958 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Rom1P32958 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.36□□□□□ -0.91
Rom1P32958 Gm45668-201ENSMUST00000211271 493 ntBASIC9.36□□□□□ -0.91
Rom1P32958 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.36□□□□□ -0.91
Rom1P32958 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Rom1P32958 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.36□□□□□ -0.91
Rom1P32958 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Rom1P32958 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Rom1P32958 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.36□□□□□ -0.91
Rom1P32958 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
Rom1P32958 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Rom1P32958 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Rom1P32958 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rom1P32958 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.35□□□□□ -0.91
Rom1P32958 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Rom1P32958 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.35□□□□□ -0.91
Rom1P32958 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Rom1P32958 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Rom1P32958 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.35□□□□□ -0.91
Rom1P32958 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.35□□□□□ -0.91
Rom1P32958 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Rom1P32958 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC9.35□□□□□ -0.91
Rom1P32958 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.35□□□□□ -0.91
Rom1P32958 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.35□□□□□ -0.91
Rom1P32958 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.35□□□□□ -0.91
Rom1P32958 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Gm39404-201ENSMUST00000216350 313 ntBASIC9.35□□□□□ -0.91
Rom1P32958 Gm17794-201ENSMUST00000220252 955 ntBASIC9.35□□□□□ -0.91
Rom1P32958 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.35□□□□□ -0.91
Rom1P32958 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.35□□□□□ -0.91
Rom1P32958 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.35□□□□□ -0.91
Rom1P32958 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms