Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hoxc5P32043 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hoxc5P32043 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hoxc5P32043 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hoxc5P32043 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hoxc5P32043 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxc5P32043 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.01□□□□□ -0.65
Hoxc5P32043 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxc5P32043 Gm5706-201ENSMUST00000181525 993 ntBASIC11.01□□□□□ -0.65
Hoxc5P32043 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.01□□□□□ -0.65
Hoxc5P32043 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.01□□□□□ -0.65
Hoxc5P32043 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hoxc5P32043 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.01□□□□□ -0.65
Hoxc5P32043 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hoxc5P32043 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hoxc5P32043 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.01□□□□□ -0.65
Hoxc5P32043 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc5P32043 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Gm36957-201ENSMUST00000192982 2824 ntBASIC11□□□□□ -0.65
Hoxc5P32043 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
Hoxc5P32043 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Hoxc5P32043 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Hoxc5P32043 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11□□□□□ -0.65
Hoxc5P32043 Gm5940-201ENSMUST00000117582 1068 ntBASIC11□□□□□ -0.65
Hoxc5P32043 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Hoxc5P32043 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11□□□□□ -0.65
Hoxc5P32043 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Hoxc5P32043 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11□□□□□ -0.65
Hoxc5P32043 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11□□□□□ -0.65
Hoxc5P32043 Gm7399-201ENSMUST00000032395 858 ntBASIC11□□□□□ -0.65
Hoxc5P32043 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11□□□□□ -0.65
Hoxc5P32043 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Gm10312-201ENSMUST00000078515 489 ntBASIC11□□□□□ -0.65
Hoxc5P32043 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Hoxc5P32043 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Hoxc5P32043 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Gm37348-201ENSMUST00000193104 1789 ntBASIC11□□□□□ -0.65
Hoxc5P32043 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11□□□□□ -0.65
Hoxc5P32043 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc5P32043 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.99□□□□□ -0.65
Hoxc5P32043 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxc5P32043 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxc5P32043 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.99□□□□□ -0.65
Hoxc5P32043 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxc5P32043 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.99□□□□□ -0.65
Hoxc5P32043 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxc5P32043 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.99□□□□□ -0.65
Hoxc5P32043 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxc5P32043 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxc5P32043 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.99□□□□□ -0.65
Hoxc5P32043 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
Hoxc5P32043 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxc5P32043 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Hoxc5P32043 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Hoxc5P32043 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hoxc5P32043 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms