Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.22□□□□□ -0.77
Slc6a1P31648 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Slc6a1P31648 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Slc6a1P31648 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.21□□□□□ -0.77
Slc6a1P31648 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Slc6a1P31648 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.21□□□□□ -0.77
Slc6a1P31648 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Slc6a1P31648 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Slc6a1P31648 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Slc6a1P31648 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.21□□□□□ -0.77
Slc6a1P31648 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.21□□□□□ -0.77
Slc6a1P31648 Gm2231-201ENSMUST00000125661 612 ntBASIC10.21□□□□□ -0.77
Slc6a1P31648 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.21□□□□□ -0.77
Slc6a1P31648 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.21□□□□□ -0.77
Slc6a1P31648 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.21□□□□□ -0.77
Slc6a1P31648 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Slc6a1P31648 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.21□□□□□ -0.77
Slc6a1P31648 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.21□□□□□ -0.77
Slc6a1P31648 Gm37497-201ENSMUST00000195830 798 ntBASIC10.21□□□□□ -0.77
Slc6a1P31648 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.21□□□□□ -0.77
Slc6a1P31648 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.21□□□□□ -0.77
Slc6a1P31648 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Slc6a1P31648 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Slc6a1P31648 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Slc6a1P31648 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.21□□□□□ -0.78
Slc6a1P31648 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc6a1P31648 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc6a1P31648 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.21□□□□□ -0.78
Slc6a1P31648 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc6a1P31648 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.21□□□□□ -0.78
Slc6a1P31648 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc6a1P31648 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc6a1P31648 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc6a1P31648 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Slc6a1P31648 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Slc6a1P31648 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Slc6a1P31648 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Slc6a1P31648 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc6a1P31648 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.21□□□□□ -0.78
Slc6a1P31648 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.21□□□□□ -0.78
Slc6a1P31648 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Slc6a1P31648 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.2□□□□□ -0.78
Slc6a1P31648 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Slc6a1P31648 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.2□□□□□ -0.78
Slc6a1P31648 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.2□□□□□ -0.78
Slc6a1P31648 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Slc6a1P31648 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Slc6a1P31648 Gm12203-201ENSMUST00000118235 598 ntBASIC10.2□□□□□ -0.78
Slc6a1P31648 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.2□□□□□ -0.78
Slc6a1P31648 Gm12209-201ENSMUST00000120089 596 ntBASIC10.2□□□□□ -0.78
Slc6a1P31648 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Slc6a1P31648 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.2□□□□□ -0.78
Slc6a1P31648 Gm8062-201ENSMUST00000139696 444 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms