Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
RxrbP28704 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.92□□□□□ -0.5
RxrbP28704 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RxrbP28704 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RxrbP28704 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.92□□□□□ -0.5
RxrbP28704 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RxrbP28704 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.92□□□□□ -0.5
RxrbP28704 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RxrbP28704 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.92□□□□□ -0.5
RxrbP28704 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RxrbP28704 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RxrbP28704 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RxrbP28704 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RxrbP28704 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
RxrbP28704 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
RxrbP28704 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RxrbP28704 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.91□□□□□ -0.5
RxrbP28704 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
RxrbP28704 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.91□□□□□ -0.5
RxrbP28704 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
RxrbP28704 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RxrbP28704 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.91□□□□□ -0.5
RxrbP28704 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.91□□□□□ -0.5
RxrbP28704 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.91□□□□□ -0.5
RxrbP28704 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.91□□□□□ -0.5
RxrbP28704 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.91□□□□□ -0.5
RxrbP28704 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RxrbP28704 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.91□□□□□ -0.5
RxrbP28704 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
RxrbP28704 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RxrbP28704 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.9□□□□□ -0.5
RxrbP28704 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
RxrbP28704 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
RxrbP28704 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RxrbP28704 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RxrbP28704 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.9□□□□□ -0.5
RxrbP28704 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
RxrbP28704 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Gm7809-201ENSMUST00000153199 742 ntBASIC11.9□□□□□ -0.5
RxrbP28704 Gm25261-201ENSMUST00000157416 134 ntBASIC11.9□□□□□ -0.5
RxrbP28704 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.9□□□□□ -0.5
RxrbP28704 Gm27023-201ENSMUST00000182372 285 ntBASIC11.9□□□□□ -0.5
RxrbP28704 Gm3890-201ENSMUST00000182416 207 ntBASIC11.9□□□□□ -0.5
RxrbP28704 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.9□□□□□ -0.5
RxrbP28704 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.9□□□□□ -0.5
RxrbP28704 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
RxrbP28704 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RxrbP28704 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.9□□□□□ -0.5
RxrbP28704 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.9□□□□□ -0.5
RxrbP28704 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RxrbP28704 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RxrbP28704 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RxrbP28704 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RxrbP28704 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
RxrbP28704 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RxrbP28704 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RxrbP28704 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RxrbP28704 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RxrbP28704 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms