Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm25766-201ENSMUST00000104101 131 ntBASIC12.28□□□□□ -0.44
Hoxd8P23463 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm6630-201ENSMUST00000119199 454 ntBASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm13937-201ENSMUST00000121000 988 ntBASIC12.28□□□□□ -0.44
Hoxd8P23463 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm8531-201ENSMUST00000188319 893 ntBASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.28□□□□□ -0.44
Hoxd8P23463 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.28□□□□□ -0.44
Hoxd8P23463 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm23680-201ENSMUST00000083162 164 ntBASIC12.28□□□□□ -0.44
Hoxd8P23463 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.28□□□□□ -0.44
Hoxd8P23463 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.28□□□□□ -0.44
Hoxd8P23463 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.28□□□□□ -0.44
Hoxd8P23463 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hoxd8P23463 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxd8P23463 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.27□□□□□ -0.44
Hoxd8P23463 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Hoxd8P23463 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxd8P23463 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.44
Hoxd8P23463 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxd8P23463 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxd8P23463 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxd8P23463 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Hoxd8P23463 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxd8P23463 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxd8P23463 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.27□□□□□ -0.44
Hoxd8P23463 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxd8P23463 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxd8P23463 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxd8P23463 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxd8P23463 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Hoxd8P23463 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.27□□□□□ -0.45
Hoxd8P23463 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Gm4294-201ENSMUST00000105169 614 ntBASIC12.27□□□□□ -0.45
Hoxd8P23463 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Gm11960-201ENSMUST00000122068 925 ntBASIC12.27□□□□□ -0.45
Hoxd8P23463 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.27□□□□□ -0.45
Hoxd8P23463 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.27□□□□□ -0.45
Hoxd8P23463 Gm26134-201ENSMUST00000178484 110 ntBASIC12.27□□□□□ -0.45
Hoxd8P23463 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.27□□□□□ -0.45
Hoxd8P23463 Gm7504-201ENSMUST00000201449 424 ntBASIC12.27□□□□□ -0.45
Hoxd8P23463 CT025561.1-201ENSMUST00000214972 674 ntBASIC12.27□□□□□ -0.45
Hoxd8P23463 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hoxd8P23463 AC165260.5-201ENSMUST00000224640 1247 ntBASIC12.27□□□□□ -0.45
Hoxd8P23463 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.27□□□□□ -0.45
Hoxd8P23463 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxd8P23463 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Hoxd8P23463 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.27□□□□□ -0.45
Hoxd8P23463 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.27□□□□□ -0.45
Hoxd8P23463 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.27□□□□□ -0.45
Hoxd8P23463 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxd8P23463 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms