Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmga1P17095 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.08□□□□□ -0.48
Hmga1P17095 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmga1P17095 Gm6485-201ENSMUST00000160676 439 ntBASIC12.08□□□□□ -0.48
Hmga1P17095 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hmga1P17095 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.08□□□□□ -0.48
Hmga1P17095 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.08□□□□□ -0.48
Hmga1P17095 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.08□□□□□ -0.48
Hmga1P17095 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.08□□□□□ -0.48
Hmga1P17095 Gm8342-201ENSMUST00000209839 757 ntBASIC12.08□□□□□ -0.48
Hmga1P17095 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.08□□□□□ -0.48
Hmga1P17095 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hmga1P17095 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hmga1P17095 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hmga1P17095 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hmga1P17095 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hmga1P17095 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.07□□□□□ -0.48
Hmga1P17095 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmga1P17095 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.07□□□□□ -0.48
Hmga1P17095 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.07□□□□□ -0.48
Hmga1P17095 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Hmga1P17095 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Hmga1P17095 Gm26047-201ENSMUST00000157308 113 ntBASIC12.07□□□□□ -0.48
Hmga1P17095 Gm22138-201ENSMUST00000158748 128 ntBASIC12.07□□□□□ -0.48
Hmga1P17095 Gm27438-201ENSMUST00000183480 110 ntBASIC12.07□□□□□ -0.48
Hmga1P17095 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Hmga1P17095 Gm3551-201ENSMUST00000190750 664 ntBASIC12.07□□□□□ -0.48
Hmga1P17095 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Gm26047-202ENSMUST00000198840 115 ntBASIC12.07□□□□□ -0.48
Hmga1P17095 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.07□□□□□ -0.48
Hmga1P17095 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmga1P17095 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hmga1P17095 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.07□□□□□ -0.48
Hmga1P17095 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmga1P17095 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.07□□□□□ -0.48
Hmga1P17095 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.07□□□□□ -0.48
Hmga1P17095 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.07□□□□□ -0.48
Hmga1P17095 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hmga1P17095 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Gm4978-201ENSMUST00000071565 801 ntBASIC12.07□□□□□ -0.48
Hmga1P17095 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Hmga1P17095 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Hmga1P17095 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.07□□□□□ -0.48
Hmga1P17095 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hmga1P17095 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hmga1P17095 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Hmga1P17095 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Hmga1P17095 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmga1P17095 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Hmga1P17095 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Hmga1P17095 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms