Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rb1P13405 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rb1P13405 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.26□□□□□ -0.45
Rb1P13405 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.26□□□□□ -0.45
Rb1P13405 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.26□□□□□ -0.45
Rb1P13405 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Rb1P13405 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.26□□□□□ -0.45
Rb1P13405 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.26□□□□□ -0.45
Rb1P13405 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.26□□□□□ -0.45
Rb1P13405 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.26□□□□□ -0.45
Rb1P13405 Mir7032-201ENSMUST00000185154 79 ntBASIC12.26□□□□□ -0.45
Rb1P13405 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.26□□□□□ -0.45
Rb1P13405 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.26□□□□□ -0.45
Rb1P13405 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.26□□□□□ -0.45
Rb1P13405 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.26□□□□□ -0.45
Rb1P13405 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rb1P13405 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.26□□□□□ -0.45
Rb1P13405 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.26□□□□□ -0.45
Rb1P13405 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.26□□□□□ -0.45
Rb1P13405 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.26□□□□□ -0.45
Rb1P13405 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rb1P13405 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Gm13408-201ENSMUST00000119822 798 ntBASIC12.25□□□□□ -0.45
Rb1P13405 Gm13813-201ENSMUST00000120998 787 ntBASIC12.25□□□□□ -0.45
Rb1P13405 Gm13935-201ENSMUST00000121859 798 ntBASIC12.25□□□□□ -0.45
Rb1P13405 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.25□□□□□ -0.45
Rb1P13405 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rb1P13405 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Gm28071-201ENSMUST00000190355 478 ntBASIC12.25□□□□□ -0.45
Rb1P13405 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.25□□□□□ -0.45
Rb1P13405 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Rb1P13405 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.25□□□□□ -0.45
Rb1P13405 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.25□□□□□ -0.45
Rb1P13405 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms