Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.13□□□□□ -0.31
Hoxc6P10629 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.13□□□□□ -0.31
Hoxc6P10629 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hoxc6P10629 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.13□□□□□ -0.31
Hoxc6P10629 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxc6P10629 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hoxc6P10629 Gm20392-201ENSMUST00000173047 701 ntBASIC13.13□□□□□ -0.31
Hoxc6P10629 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.13□□□□□ -0.31
Hoxc6P10629 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Gm6722-201ENSMUST00000221586 390 ntBASIC13.13□□□□□ -0.31
Hoxc6P10629 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.13□□□□□ -0.31
Hoxc6P10629 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hoxc6P10629 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.13□□□□□ -0.31
Hoxc6P10629 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxc6P10629 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Hoxc6P10629 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.13□□□□□ -0.31
Hoxc6P10629 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.13□□□□□ -0.31
Hoxc6P10629 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Gm13117-201ENSMUST00000120894 691 ntBASIC13.12□□□□□ -0.31
Hoxc6P10629 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.12□□□□□ -0.31
Hoxc6P10629 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.12□□□□□ -0.31
Hoxc6P10629 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Hoxc6P10629 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.12□□□□□ -0.31
Hoxc6P10629 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc6P10629 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.12□□□□□ -0.31
Hoxc6P10629 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Hoxc6P10629 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.11□□□□□ -0.31
Hoxc6P10629 Gm12036-201ENSMUST00000120008 530 ntBASIC13.11□□□□□ -0.31
Hoxc6P10629 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Gm4862-201ENSMUST00000170405 438 ntBASIC13.11□□□□□ -0.31
Hoxc6P10629 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.11□□□□□ -0.31
Hoxc6P10629 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.11□□□□□ -0.31
Hoxc6P10629 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.11□□□□□ -0.31
Hoxc6P10629 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.11□□□□□ -0.31
Hoxc6P10629 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.11□□□□□ -0.31
Hoxc6P10629 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.11□□□□□ -0.31
Hoxc6P10629 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hoxc6P10629 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.11□□□□□ -0.31
Hoxc6P10629 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms