Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Gm25053-201ENSMUST00000103982 133 ntBASIC12.55□□□□□ -0.4
Hoxc8P09025 Gm25922-201ENSMUST00000104281 130 ntBASIC12.55□□□□□ -0.4
Hoxc8P09025 Gm25148-201ENSMUST00000104611 123 ntBASIC12.55□□□□□ -0.4
Hoxc8P09025 Gm9673-201ENSMUST00000119287 781 ntBASIC12.55□□□□□ -0.4
Hoxc8P09025 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.55□□□□□ -0.4
Hoxc8P09025 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.55□□□□□ -0.4
Hoxc8P09025 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Gm24248-201ENSMUST00000157321 322 ntBASIC12.55□□□□□ -0.4
Hoxc8P09025 Gm24679-201ENSMUST00000158762 111 ntBASIC12.55□□□□□ -0.4
Hoxc8P09025 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Gm25053-202ENSMUST00000199731 132 ntBASIC12.55□□□□□ -0.4
Hoxc8P09025 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.55□□□□□ -0.4
Hoxc8P09025 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc8P09025 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.54□□□□□ -0.4
Hoxc8P09025 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc8P09025 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hoxc8P09025 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc8P09025 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm14270-201ENSMUST00000118388 846 ntBASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm11700-201ENSMUST00000119409 403 ntBASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm11980-201ENSMUST00000121445 986 ntBASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.54□□□□□ -0.4
Hoxc8P09025 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm23694-201ENSMUST00000179335 110 ntBASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm29067-201ENSMUST00000190821 470 ntBASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxc8P09025 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.54□□□□□ -0.4
Hoxc8P09025 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm25201-201ENSMUST00000083093 170 ntBASIC12.54□□□□□ -0.4
Hoxc8P09025 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.54□□□□□ -0.4
Hoxc8P09025 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc8P09025 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc8P09025 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hoxc8P09025 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc8P09025 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc8P09025 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.53□□□□□ -0.4
Hoxc8P09025 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Gm14807-201ENSMUST00000116640 983 ntBASIC12.53□□□□□ -0.4
Hoxc8P09025 Gm11801-201ENSMUST00000117807 746 ntBASIC12.53□□□□□ -0.4
Hoxc8P09025 Gm13022-201ENSMUST00000121181 285 ntBASIC12.53□□□□□ -0.4
Hoxc8P09025 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms