Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm5749-201ENSMUST00000210673 1090 ntBASIC14□□□□□ -0.17
Col3a1P08121 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14□□□□□ -0.17
Col3a1P08121 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14□□□□□ -0.17
Col3a1P08121 CT009527.1-201ENSMUST00000224205 339 ntBASIC14□□□□□ -0.17
Col3a1P08121 AC165154.1-201ENSMUST00000226661 340 ntBASIC14□□□□□ -0.17
Col3a1P08121 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Col3a1P08121 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14□□□□□ -0.17
Col3a1P08121 Gm44443-201ENSMUST00000204396 5633 ntBASIC14□□□□□ -0.17
Col3a1P08121 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14□□□□□ -0.17
Col3a1P08121 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Gm14219-201ENSMUST00000120414 288 ntBASIC13.99□□□□□ -0.17
Col3a1P08121 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.99□□□□□ -0.17
Col3a1P08121 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Col3a1P08121 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.99□□□□□ -0.17
Col3a1P08121 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.99□□□□□ -0.17
Col3a1P08121 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.99□□□□□ -0.17
Col3a1P08121 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.99□□□□□ -0.17
Col3a1P08121 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col3a1P08121 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.99□□□□□ -0.17
Col3a1P08121 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.99□□□□□ -0.17
Col3a1P08121 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col3a1P08121 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col3a1P08121 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Col3a1P08121 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
Col3a1P08121 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.99□□□□□ -0.17
Col3a1P08121 Gm12030-201ENSMUST00000121917 223 ntBASIC13.99□□□□□ -0.17
Col3a1P08121 Gm12628-201ENSMUST00000122193 382 ntBASIC13.99□□□□□ -0.17
Col3a1P08121 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Col3a1P08121 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Gm23694-201ENSMUST00000179335 110 ntBASIC13.99□□□□□ -0.17
Col3a1P08121 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.99□□□□□ -0.17
Col3a1P08121 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col3a1P08121 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col3a1P08121 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col3a1P08121 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.99□□□□□ -0.17
Col3a1P08121 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col3a1P08121 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.98□□□□□ -0.17
Col3a1P08121 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col3a1P08121 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col3a1P08121 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col3a1P08121 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col3a1P08121 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col3a1P08121 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Col3a1P08121 Gm12218-201ENSMUST00000117666 399 ntBASIC13.98□□□□□ -0.17
Col3a1P08121 Gm13600-201ENSMUST00000117949 744 ntBASIC13.98□□□□□ -0.17
Col3a1P08121 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col3a1P08121 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.98□□□□□ -0.17
Col3a1P08121 Gm25554-201ENSMUST00000158075 113 ntBASIC13.98□□□□□ -0.17
Col3a1P08121 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.98□□□□□ -0.17
Col3a1P08121 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col3a1P08121 Gm29067-201ENSMUST00000190821 470 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms