Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
TnfP06804 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TnfP06804 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.57□□□□□ -0.4
TnfP06804 Rubie-203ENSMUST00000227803 2430 ntBASIC12.57□□□□□ -0.4
TnfP06804 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TnfP06804 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TnfP06804 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.57□□□□□ -0.4
TnfP06804 Gm12029-201ENSMUST00000120073 832 ntBASIC12.57□□□□□ -0.4
TnfP06804 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.57□□□□□ -0.4
TnfP06804 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.57□□□□□ -0.4
TnfP06804 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.57□□□□□ -0.4
TnfP06804 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Gm44126-201ENSMUST00000204831 514 ntBASIC12.57□□□□□ -0.4
TnfP06804 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.57□□□□□ -0.4
TnfP06804 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.57□□□□□ -0.4
TnfP06804 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnfP06804 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TnfP06804 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.56□□□□□ -0.4
TnfP06804 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.56□□□□□ -0.4
TnfP06804 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.56□□□□□ -0.4
TnfP06804 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.56□□□□□ -0.4
TnfP06804 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.56□□□□□ -0.4
TnfP06804 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TnfP06804 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
TnfP06804 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TnfP06804 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.56□□□□□ -0.4
TnfP06804 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TnfP06804 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
TnfP06804 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
TnfP06804 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TnfP06804 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.56□□□□□ -0.4
TnfP06804 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Gm24844-201ENSMUST00000158679 127 ntBASIC12.56□□□□□ -0.4
TnfP06804 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.56□□□□□ -0.4
TnfP06804 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.56□□□□□ -0.4
TnfP06804 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.56□□□□□ -0.4
TnfP06804 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
TnfP06804 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.56□□□□□ -0.4
TnfP06804 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
TnfP06804 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.56□□□□□ -0.4
TnfP06804 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TnfP06804 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TnfP06804 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.56□□□□□ -0.4
TnfP06804 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TnfP06804 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TnfP06804 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.55□□□□□ -0.4
TnfP06804 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.55□□□□□ -0.4
TnfP06804 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.55□□□□□ -0.4
TnfP06804 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
TnfP06804 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TnfP06804 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms