Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P06344 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P06344 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.58□□□□□ -0.71
P06344 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
P06344 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.58□□□□□ -0.72
P06344 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.58□□□□□ -0.72
P06344 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.58□□□□□ -0.72
P06344 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.58□□□□□ -0.72
P06344 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.58□□□□□ -0.72
P06344 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.58□□□□□ -0.72
P06344 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
P06344 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.58□□□□□ -0.72
P06344 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.58□□□□□ -0.72
P06344 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
P06344 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.58□□□□□ -0.72
P06344 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.58□□□□□ -0.72
P06344 Gm27530-201ENSMUST00000184096 98 ntBASIC10.58□□□□□ -0.72
P06344 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.58□□□□□ -0.72
P06344 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Gm43378-201ENSMUST00000199336 582 ntBASIC10.58□□□□□ -0.72
P06344 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.58□□□□□ -0.72
P06344 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.58□□□□□ -0.72
P06344 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P06344 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P06344 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P06344 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
P06344 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P06344 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P06344 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.57□□□□□ -0.72
P06344 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P06344 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P06344 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.57□□□□□ -0.72
P06344 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P06344 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P06344 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P06344 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P06344 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Gm15004-201ENSMUST00000119192 630 ntBASIC10.57□□□□□ -0.72
P06344 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.57□□□□□ -0.72
P06344 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.57□□□□□ -0.72
P06344 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.57□□□□□ -0.72
P06344 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.57□□□□□ -0.72
P06344 Gm4482-201ENSMUST00000200876 742 ntBASIC10.57□□□□□ -0.72
P06344 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Gm9797-202ENSMUST00000218003 294 ntBASIC10.57□□□□□ -0.72
P06344 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.57□□□□□ -0.72
P06344 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P06344 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms