Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.35□□□□□ -0.59
P04213 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.34□□□□□ -0.59
P04213 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.34□□□□□ -0.59
P04213 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
P04213 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
P04213 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
P04213 Gm26286-201ENSMUST00000104166 134 ntBASIC11.34□□□□□ -0.59
P04213 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.34□□□□□ -0.59
P04213 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.34□□□□□ -0.59
P04213 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.34□□□□□ -0.59
P04213 Gm38317-201ENSMUST00000195564 343 ntBASIC11.34□□□□□ -0.59
P04213 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Gm19287-201ENSMUST00000203190 358 ntBASIC11.34□□□□□ -0.59
P04213 Gm44967-201ENSMUST00000207047 631 ntBASIC11.34□□□□□ -0.59
P04213 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.34□□□□□ -0.59
P04213 Lect2-202ENSMUST00000225183 823 ntBASIC11.34□□□□□ -0.59
P04213 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
P04213 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
P04213 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.34□□□□□ -0.59
P04213 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
P04213 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
P04213 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04213 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
P04213 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.33□□□□□ -0.6
P04213 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
P04213 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.33□□□□□ -0.6
P04213 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.33□□□□□ -0.6
P04213 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
P04213 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.33□□□□□ -0.6
P04213 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P04213 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
P04213 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
P04213 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.33□□□□□ -0.6
P04213 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Gm43822-201ENSMUST00000200285 476 ntBASIC11.33□□□□□ -0.6
P04213 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Gm44651-201ENSMUST00000207343 372 ntBASIC11.33□□□□□ -0.6
P04213 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P04213 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.33□□□□□ -0.6
P04213 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.33□□□□□ -0.6
P04213 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P04213 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.33□□□□□ -0.6
P04213 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
P04213 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P04213 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
P04213 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P04213 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.33□□□□□ -0.6
P04213 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P04213 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.32□□□□□ -0.6
P04213 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04213 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04213 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms