Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC8.65□□□□□ -1.02
TcraP01849 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC8.65□□□□□ -1.02
TcraP01849 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC8.65□□□□□ -1.02
TcraP01849 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
TcraP01849 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
TcraP01849 Gm9115-201ENSMUST00000120192 1348 ntBASIC8.65□□□□□ -1.02
TcraP01849 Gm43522-201ENSMUST00000196697 1922 ntBASIC8.65□□□□□ -1.02
TcraP01849 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
TcraP01849 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC8.65□□□□□ -1.02
TcraP01849 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Gm6652-201ENSMUST00000186414 1070 ntBASIC8.65□□□□□ -1.02
TcraP01849 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC8.65□□□□□ -1.02
TcraP01849 Gm6745-201ENSMUST00000199216 526 ntBASIC8.65□□□□□ -1.02
TcraP01849 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC8.65□□□□□ -1.02
TcraP01849 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC8.65□□□□□ -1.02
TcraP01849 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
TcraP01849 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
TcraP01849 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TcraP01849 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
TcraP01849 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.03
TcraP01849 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC8.65□□□□□ -1.03
TcraP01849 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
TcraP01849 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
TcraP01849 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Gm38292-201ENSMUST00000192646 3045 ntBASIC8.64□□□□□ -1.03
TcraP01849 AC154314.2-201ENSMUST00000223677 3502 ntBASIC8.64□□□□□ -1.03
TcraP01849 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
TcraP01849 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Gm19040-201ENSMUST00000203280 4726 ntBASIC8.64□□□□□ -1.03
TcraP01849 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 AC138329.2-201ENSMUST00000225579 1842 ntBASIC8.64□□□□□ -1.03
TcraP01849 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Gm11618-201ENSMUST00000117946 267 ntBASIC8.64□□□□□ -1.03
TcraP01849 Gm12201-201ENSMUST00000120657 1234 ntBASIC8.64□□□□□ -1.03
TcraP01849 Gm5863-201ENSMUST00000121760 1008 ntBASIC8.64□□□□□ -1.03
TcraP01849 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC8.64□□□□□ -1.03
TcraP01849 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Gm23984-201ENSMUST00000157139 203 ntBASIC8.64□□□□□ -1.03
TcraP01849 Rmrp-201ENSMUST00000157463 271 ntBASIC8.64□□□□□ -1.03
TcraP01849 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms