Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.2□□□□□ -0.46
CopeO89079 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.2□□□□□ -0.46
CopeO89079 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CopeO89079 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Gm6023-201ENSMUST00000118217 606 ntBASIC12.2□□□□□ -0.46
CopeO89079 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.2□□□□□ -0.46
CopeO89079 Gm14832-201ENSMUST00000121289 322 ntBASIC12.2□□□□□ -0.46
CopeO89079 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.2□□□□□ -0.46
CopeO89079 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.2□□□□□ -0.46
CopeO89079 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CopeO89079 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.2□□□□□ -0.46
CopeO89079 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.2□□□□□ -0.46
CopeO89079 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.2□□□□□ -0.46
CopeO89079 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.2□□□□□ -0.46
CopeO89079 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.2□□□□□ -0.46
CopeO89079 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CopeO89079 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.2□□□□□ -0.46
CopeO89079 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.2□□□□□ -0.46
CopeO89079 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CopeO89079 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.2□□□□□ -0.46
CopeO89079 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.2□□□□□ -0.46
CopeO89079 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CopeO89079 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.19□□□□□ -0.46
CopeO89079 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CopeO89079 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.19□□□□□ -0.46
CopeO89079 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Gm5419-201ENSMUST00000119301 527 ntBASIC12.19□□□□□ -0.46
CopeO89079 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.19□□□□□ -0.46
CopeO89079 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.19□□□□□ -0.46
CopeO89079 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.19□□□□□ -0.46
CopeO89079 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.19□□□□□ -0.46
CopeO89079 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.19□□□□□ -0.46
CopeO89079 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.19□□□□□ -0.46
CopeO89079 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.19□□□□□ -0.46
CopeO89079 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CopeO89079 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.19□□□□□ -0.46
CopeO89079 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
CopeO89079 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CopeO89079 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopeO89079 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.19□□□□□ -0.46
CopeO89079 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.19□□□□□ -0.46
CopeO89079 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms