Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm42937-201ENSMUST00000197360 752 ntBASIC11.69□□□□□ -0.54
ClppO88696 AU022133-201ENSMUST00000200601 873 ntBASIC11.69□□□□□ -0.54
ClppO88696 Gm3786-201ENSMUST00000202659 378 ntBASIC11.69□□□□□ -0.54
ClppO88696 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
ClppO88696 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.69□□□□□ -0.54
ClppO88696 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.69□□□□□ -0.54
ClppO88696 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ClppO88696 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
ClppO88696 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.69□□□□□ -0.54
ClppO88696 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.69□□□□□ -0.54
ClppO88696 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.68□□□□□ -0.54
ClppO88696 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Gm23200-201ENSMUST00000104379 132 ntBASIC11.68□□□□□ -0.54
ClppO88696 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Gm18734-201ENSMUST00000172937 808 ntBASIC11.68□□□□□ -0.54
ClppO88696 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
ClppO88696 Gm28071-201ENSMUST00000190355 478 ntBASIC11.68□□□□□ -0.54
ClppO88696 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.68□□□□□ -0.54
ClppO88696 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.68□□□□□ -0.54
ClppO88696 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.68□□□□□ -0.54
ClppO88696 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClppO88696 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
ClppO88696 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
ClppO88696 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
ClppO88696 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.67□□□□□ -0.54
ClppO88696 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.67□□□□□ -0.54
ClppO88696 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 AC154352.1-201ENSMUST00000221477 2365 ntBASIC11.67□□□□□ -0.54
ClppO88696 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.67□□□□□ -0.54
ClppO88696 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
ClppO88696 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.67□□□□□ -0.54
ClppO88696 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Mir3547-201ENSMUST00000175461 88 ntBASIC11.67□□□□□ -0.54
ClppO88696 Gm27552-201ENSMUST00000183351 62 ntBASIC11.67□□□□□ -0.54
ClppO88696 Gm27844-201ENSMUST00000183613 62 ntBASIC11.67□□□□□ -0.54
ClppO88696 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
ClppO88696 Gm18038-201ENSMUST00000197900 485 ntBASIC11.67□□□□□ -0.54
ClppO88696 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.67□□□□□ -0.54
ClppO88696 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms