Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cops6O88545 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Cops6O88545 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.44□□□□□ -0.1
Cops6O88545 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.44□□□□□ -0.1
Cops6O88545 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Cops6O88545 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cops6O88545 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cops6O88545 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.43□□□□□ -0.1
Cops6O88545 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cops6O88545 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.43□□□□□ -0.1
Cops6O88545 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.43□□□□□ -0.1
Cops6O88545 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Gm29155-201ENSMUST00000185910 269 ntBASIC14.43□□□□□ -0.1
Cops6O88545 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.43□□□□□ -0.1
Cops6O88545 Gm37028-201ENSMUST00000194276 107 ntBASIC14.43□□□□□ -0.1
Cops6O88545 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.43□□□□□ -0.1
Cops6O88545 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.43□□□□□ -0.1
Cops6O88545 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.43□□□□□ -0.1
Cops6O88545 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.43□□□□□ -0.1
Cops6O88545 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.43□□□□□ -0.1
Cops6O88545 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.43□□□□□ -0.1
Cops6O88545 AC164437.3-201ENSMUST00000228323 347 ntBASIC14.43□□□□□ -0.1
Cops6O88545 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cops6O88545 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cops6O88545 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cops6O88545 Gm15615-201ENSMUST00000118876 198 ntBASIC14.42□□□□□ -0.1
Cops6O88545 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.42□□□□□ -0.1
Cops6O88545 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.42□□□□□ -0.1
Cops6O88545 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cops6O88545 Gm8531-201ENSMUST00000188319 893 ntBASIC14.42□□□□□ -0.1
Cops6O88545 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Gm7504-201ENSMUST00000201449 424 ntBASIC14.42□□□□□ -0.1
Cops6O88545 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.42□□□□□ -0.1
Cops6O88545 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cops6O88545 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.42□□□□□ -0.1
Cops6O88545 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cops6O88545 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops6O88545 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cops6O88545 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms