Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.58□□□□□ -0.72
Col5a1O88207 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Col5a1O88207 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Col5a1O88207 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.58□□□□□ -0.72
Col5a1O88207 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.58□□□□□ -0.72
Col5a1O88207 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.58□□□□□ -0.72
Col5a1O88207 Gm29304-201ENSMUST00000186555 695 ntBASIC10.58□□□□□ -0.72
Col5a1O88207 Gm29223-201ENSMUST00000188867 695 ntBASIC10.58□□□□□ -0.72
Col5a1O88207 Gm37921-201ENSMUST00000194333 695 ntBASIC10.58□□□□□ -0.72
Col5a1O88207 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.58□□□□□ -0.72
Col5a1O88207 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.58□□□□□ -0.72
Col5a1O88207 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Col5a1O88207 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Col5a1O88207 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Col5a1O88207 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Col5a1O88207 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col5a1O88207 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.57□□□□□ -0.72
Col5a1O88207 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.57□□□□□ -0.72
Col5a1O88207 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
Col5a1O88207 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.57□□□□□ -0.72
Col5a1O88207 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Col5a1O88207 Gm15374-201ENSMUST00000119313 844 ntBASIC10.57□□□□□ -0.72
Col5a1O88207 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.57□□□□□ -0.72
Col5a1O88207 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col5a1O88207 Mir6973a-201ENSMUST00000183646 78 ntBASIC10.57□□□□□ -0.72
Col5a1O88207 Gm34379-201ENSMUST00000195036 290 ntBASIC10.57□□□□□ -0.72
Col5a1O88207 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC10.57□□□□□ -0.72
Col5a1O88207 Gm30671-201ENSMUST00000214898 318 ntBASIC10.57□□□□□ -0.72
Col5a1O88207 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.57□□□□□ -0.72
Col5a1O88207 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.57□□□□□ -0.72
Col5a1O88207 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Col5a1O88207 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.57□□□□□ -0.72
Col5a1O88207 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col5a1O88207 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.57□□□□□ -0.72
Col5a1O88207 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col5a1O88207 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col5a1O88207 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.57□□□□□ -0.72
Col5a1O88207 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
Col5a1O88207 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col5a1O88207 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col5a1O88207 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col5a1O88207 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col5a1O88207 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col5a1O88207 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col5a1O88207 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.56□□□□□ -0.72
Col5a1O88207 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.56□□□□□ -0.72
Col5a1O88207 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col5a1O88207 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Col5a1O88207 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Col5a1O88207 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col5a1O88207 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col5a1O88207 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.56□□□□□ -0.72
Col5a1O88207 Gm22379-201ENSMUST00000157480 131 ntBASIC10.56□□□□□ -0.72
Col5a1O88207 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Col5a1O88207 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col5a1O88207 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col5a1O88207 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.56□□□□□ -0.72
Col5a1O88207 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.56□□□□□ -0.72
Col5a1O88207 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col5a1O88207 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.56□□□□□ -0.72
Col5a1O88207 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms