Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.96□□□□□ -0.49
Chrna4O70174 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Chrna4O70174 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.96□□□□□ -0.49
Chrna4O70174 Gm9797-202ENSMUST00000218003 294 ntBASIC11.96□□□□□ -0.49
Chrna4O70174 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chrna4O70174 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chrna4O70174 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chrna4O70174 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Chrna4O70174 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Chrna4O70174 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Chrna4O70174 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chrna4O70174 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Chrna4O70174 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Chrna4O70174 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chrna4O70174 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chrna4O70174 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chrna4O70174 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chrna4O70174 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.95□□□□□ -0.5
Chrna4O70174 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chrna4O70174 Gm23949-201ENSMUST00000104027 127 ntBASIC11.95□□□□□ -0.5
Chrna4O70174 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chrna4O70174 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.95□□□□□ -0.5
Chrna4O70174 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chrna4O70174 Gm11660-201ENSMUST00000120955 412 ntBASIC11.95□□□□□ -0.5
Chrna4O70174 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Chrna4O70174 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.95□□□□□ -0.5
Chrna4O70174 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Chrna4O70174 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Chrna4O70174 Gm27530-201ENSMUST00000184096 98 ntBASIC11.95□□□□□ -0.5
Chrna4O70174 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.95□□□□□ -0.5
Chrna4O70174 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.95□□□□□ -0.5
Chrna4O70174 Gm4157-201ENSMUST00000211647 679 ntBASIC11.95□□□□□ -0.5
Chrna4O70174 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.95□□□□□ -0.5
Chrna4O70174 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Chrna4O70174 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chrna4O70174 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chrna4O70174 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chrna4O70174 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Chrna4O70174 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.94□□□□□ -0.5
Chrna4O70174 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.94□□□□□ -0.5
Chrna4O70174 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Gm8343-201ENSMUST00000182705 994 ntBASIC11.94□□□□□ -0.5
Chrna4O70174 Gm28071-201ENSMUST00000190355 478 ntBASIC11.94□□□□□ -0.5
Chrna4O70174 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Gm8385-201ENSMUST00000058999 643 ntBASIC11.94□□□□□ -0.5
Chrna4O70174 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Chrna4O70174 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chrna4O70174 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.94□□□□□ -0.5
Chrna4O70174 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.94□□□□□ -0.5
Chrna4O70174 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.94□□□□□ -0.5
Chrna4O70174 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chrna4O70174 Paupar-201ENSMUST00000194826 3482 ntBASIC11.94□□□□□ -0.5
Chrna4O70174 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Chrna4O70174 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.93□□□□□ -0.5
Chrna4O70174 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Chrna4O70174 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chrna4O70174 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 319.3 ms