Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.07□□□□□ -0.16
Smarce1O54941 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.07□□□□□ -0.16
Smarce1O54941 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarce1O54941 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarce1O54941 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Smarce1O54941 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.07□□□□□ -0.16
Smarce1O54941 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarce1O54941 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.06□□□□□ -0.16
Smarce1O54941 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Smarce1O54941 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.06□□□□□ -0.16
Smarce1O54941 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Smarce1O54941 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smarce1O54941 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.06□□□□□ -0.16
Smarce1O54941 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smarce1O54941 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.06□□□□□ -0.16
Smarce1O54941 Gm29396-201ENSMUST00000185659 716 ntBASIC14.06□□□□□ -0.16
Smarce1O54941 Gm18187-201ENSMUST00000196476 984 ntBASIC14.06□□□□□ -0.16
Smarce1O54941 Gm45880-201ENSMUST00000213041 853 ntBASIC14.06□□□□□ -0.16
Smarce1O54941 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC14.06□□□□□ -0.16
Smarce1O54941 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smarce1O54941 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smarce1O54941 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarce1O54941 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Smarce1O54941 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC14.05□□□□□ -0.16
Smarce1O54941 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smarce1O54941 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Smarce1O54941 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Gm12015-201ENSMUST00000117065 843 ntBASIC14.05□□□□□ -0.16
Smarce1O54941 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.05□□□□□ -0.16
Smarce1O54941 Gm9192-201ENSMUST00000183221 985 ntBASIC14.05□□□□□ -0.16
Smarce1O54941 Gm19287-201ENSMUST00000203190 358 ntBASIC14.05□□□□□ -0.16
Smarce1O54941 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.05□□□□□ -0.16
Smarce1O54941 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.05□□□□□ -0.16
Smarce1O54941 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.05□□□□□ -0.16
Smarce1O54941 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Smarce1O54941 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smarce1O54941 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarce1O54941 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smarce1O54941 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smarce1O54941 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarce1O54941 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smarce1O54941 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms