Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Ndufb11O09111 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.41□□□□□ -0.9
Ndufb11O09111 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Ndufb11O09111 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.41□□□□□ -0.9
Ndufb11O09111 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.41□□□□□ -0.9
Ndufb11O09111 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Ndufb11O09111 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.41□□□□□ -0.9
Ndufb11O09111 Gm18889-201ENSMUST00000174284 929 ntBASIC9.41□□□□□ -0.9
Ndufb11O09111 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.41□□□□□ -0.9
Ndufb11O09111 Gm27533-201ENSMUST00000183800 152 ntBASIC9.41□□□□□ -0.9
Ndufb11O09111 Mir8117-201ENSMUST00000184773 107 ntBASIC9.41□□□□□ -0.9
Ndufb11O09111 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.41□□□□□ -0.9
Ndufb11O09111 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Ndufb11O09111 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ndufb11O09111 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.41□□□□□ -0.9
Ndufb11O09111 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufb11O09111 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Ndufb11O09111 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Ndufb11O09111 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Ndufb11O09111 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.4□□□□□ -0.9
Ndufb11O09111 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ndufb11O09111 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC9.4□□□□□ -0.9
Ndufb11O09111 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Ndufb11O09111 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.4□□□□□ -0.9
Ndufb11O09111 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Ndufb11O09111 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufb11O09111 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms