Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Gm13351-201ENSMUST00000118087 414 ntBASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Gm15549-201ENSMUST00000121595 622 ntBASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Gm25492-201ENSMUST00000157383 129 ntBASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Gm26989-201ENSMUST00000182608 749 ntBASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Gm7082-201ENSMUST00000209880 969 ntBASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Gm5996-201ENSMUST00000211110 718 ntBASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
B020004C17RikJ3QP07 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Gm11500-201ENSMUST00000118237 601 ntBASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Gm5257-201ENSMUST00000121823 790 ntBASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Gm6423-201ENSMUST00000204315 934 ntBASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
B020004C17RikJ3QP07 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
B020004C17RikJ3QP07 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
B020004C17RikJ3QP07 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
B020004C17RikJ3QP07 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
B020004C17RikJ3QP07 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
B020004C17RikJ3QP07 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
B020004C17RikJ3QP07 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
B020004C17RikJ3QP07 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
B020004C17RikJ3QP07 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
B020004C17RikJ3QP07 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.21□□□□□ -0.3
B020004C17RikJ3QP07 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms