Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ccdc180J3QNE4 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Gm35713-201ENSMUST00000210516 199 ntBASIC21.31■■□□□ 1
Ccdc180J3QNE4 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc180J3QNE4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Gm44443-201ENSMUST00000204396 5633 ntBASIC21.3■■□□□ 1
Ccdc180J3QNE4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC21.3■■□□□ 1
Ccdc180J3QNE4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Gm6855-201ENSMUST00000206307 790 ntBASIC21.3■■□□□ 1
Ccdc180J3QNE4 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Gm45500-201ENSMUST00000211676 803 ntBASIC21.3■■□□□ 1
Ccdc180J3QNE4 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Gm6653-201ENSMUST00000218063 1288 ntBASIC21.3■■□□□ 1
Ccdc180J3QNE4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc180J3QNE4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Gm23612-201ENSMUST00000103823 110 ntBASIC21.29■■□□□ 1
Ccdc180J3QNE4 Gm20414-201ENSMUST00000172918 646 ntBASIC21.29■■□□□ 1
Ccdc180J3QNE4 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Gm23576-201ENSMUST00000179918 110 ntBASIC21.29■■□□□ 1
Ccdc180J3QNE4 Gm5599-201ENSMUST00000209602 788 ntBASIC21.29■■□□□ 1
Ccdc180J3QNE4 Gm18204-201ENSMUST00000209835 793 ntBASIC21.29■■□□□ 1
Ccdc180J3QNE4 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC21.29■■□□□ 1
Ccdc180J3QNE4 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc180J3QNE4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Gm29067-201ENSMUST00000190821 470 ntBASIC21.28■■□□□ 1
Ccdc180J3QNE4 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Gm5468-202ENSMUST00000227851 682 ntBASIC21.28■■□□□ 1
Ccdc180J3QNE4 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Gm9081-201ENSMUST00000182346 991 ntBASIC21.28■■□□□ 1
Ccdc180J3QNE4 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Gm44323-201ENSMUST00000198689 129 ntBASIC21.28■■□□□ 1
Ccdc180J3QNE4 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC21.28■■□□□ 1
Ccdc180J3QNE4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Gm38577-201ENSMUST00000221531 4545 ntBASIC21.27■■□□□ 1
Ccdc180J3QNE4 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Gm5308-201ENSMUST00000196752 1354 ntBASIC21.27■■□□□ 1
Ccdc180J3QNE4 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc180J3QNE4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ccdc180J3QNE4 Gm7104-201ENSMUST00000179741 2532 ntBASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 124 ms