Protein–RNA interactions for Protein: J3QK56

4930544D05Rik, RIKEN cDNA 4930544D05 gene, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930544D05RikJ3QK56 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Gm12196-201ENSMUST00000120954 262 ntBASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Gm11660-201ENSMUST00000120955 412 ntBASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Gm38117-201ENSMUST00000194653 939 ntBASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
4930544D05RikJ3QK56 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
4930544D05RikJ3QK56 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
4930544D05RikJ3QK56 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.65□□□□□ -0.39
4930544D05RikJ3QK56 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
4930544D05RikJ3QK56 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
4930544D05RikJ3QK56 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Gm11960-201ENSMUST00000122068 925 ntBASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Gm5733-201ENSMUST00000190232 939 ntBASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Erich3-203ENSMUST00000189969 3460 ntBASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
4930544D05RikJ3QK56 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
4930544D05RikJ3QK56 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
4930544D05RikJ3QK56 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
4930544D05RikJ3QK56 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
4930544D05RikJ3QK56 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
4930544D05RikJ3QK56 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
4930544D05RikJ3QK56 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
4930544D05RikJ3QK56 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
4930544D05RikJ3QK56 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
4930544D05RikJ3QK56 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms