Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Gm24809-201ENSMUST00000175318 271 ntBASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Gm8325-201ENSMUST00000099086 453 ntBASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Gm13422-201ENSMUST00000118834 504 ntBASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Gm16219-201ENSMUST00000120096 274 ntBASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Gm29164-201ENSMUST00000185454 1024 ntBASIC17.66■□□□□ 0.42
Pcf11G3X9Z4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Gm42913-201ENSMUST00000197936 1853 ntBASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Gm24248-201ENSMUST00000157321 322 ntBASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Gm22379-201ENSMUST00000157480 131 ntBASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Gm9135-201ENSMUST00000182963 990 ntBASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Gm43692-201ENSMUST00000198236 1062 ntBASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Gm43002-201ENSMUST00000200310 155 ntBASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcf11G3X9Z4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcf11G3X9Z4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Gm3329-201ENSMUST00000159873 556 ntBASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Gm43102-201ENSMUST00000201004 2324 ntBASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcf11G3X9Z4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 Gm12389-201ENSMUST00000117696 418 ntBASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 AC168279.1-201ENSMUST00000214611 382 ntBASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcf11G3X9Z4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms