Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Colca2F8VPY8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Colca2F8VPY8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Colca2F8VPY8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Colca2F8VPY8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.16□□□□□ -0.62
Colca2F8VPY8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.16□□□□□ -0.62
Colca2F8VPY8 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Gm21778-201ENSMUST00000178779 471 ntBASIC11.16□□□□□ -0.62
Colca2F8VPY8 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.16□□□□□ -0.62
Colca2F8VPY8 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.16□□□□□ -0.62
Colca2F8VPY8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Colca2F8VPY8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gm8302-201ENSMUST00000119217 852 ntBASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gm14165-201ENSMUST00000121456 952 ntBASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gm20495-201ENSMUST00000173902 235 ntBASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gm24328-201ENSMUST00000175104 67 ntBASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gm26272-201ENSMUST00000179241 132 ntBASIC11.15□□□□□ -0.62
Colca2F8VPY8 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gm26976-201ENSMUST00000182929 908 ntBASIC11.15□□□□□ -0.62
Colca2F8VPY8 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gm43969-201ENSMUST00000204833 535 ntBASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gm5599-201ENSMUST00000209602 788 ntBASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gm18035-201ENSMUST00000211962 589 ntBASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gm8255-201ENSMUST00000218693 305 ntBASIC11.15□□□□□ -0.62
Colca2F8VPY8 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.15□□□□□ -0.62
Colca2F8VPY8 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.15□□□□□ -0.62
Colca2F8VPY8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms