Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Gm24791-201ENSMUST00000104284 131 ntBASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Gm26013-201ENSMUST00000104404 119 ntBASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Gm13286-201ENSMUST00000117750 537 ntBASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Gm13019-201ENSMUST00000120000 276 ntBASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Gm9630-201ENSMUST00000178304 885 ntBASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.38□□□□□ -0.27
Syngap1F6SEU4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.38□□□□□ -0.27
Syngap1F6SEU4 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syngap1F6SEU4 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Rubie-203ENSMUST00000227803 2430 ntBASIC13.37□□□□□ -0.27
Syngap1F6SEU4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm25063-201ENSMUST00000104666 94 ntBASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.37□□□□□ -0.27
Syngap1F6SEU4 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm43854-201ENSMUST00000200418 394 ntBASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm29763-201ENSMUST00000205306 616 ntBASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm44647-201ENSMUST00000207402 428 ntBASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm18499-201ENSMUST00000220808 1021 ntBASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syngap1F6SEU4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Gm7722-201ENSMUST00000120646 741 ntBASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Gm11502-201ENSMUST00000120917 1211 ntBASIC13.36□□□□□ -0.27
Syngap1F6SEU4 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syngap1F6SEU4 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms