Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube4aE9Q735 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ube4aE9Q735 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube4aE9Q735 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube4aE9Q735 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube4aE9Q735 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ube4aE9Q735 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube4aE9Q735 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube4aE9Q735 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Ube4aE9Q735 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.2□□□□□ -0.14
Ube4aE9Q735 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Gm25766-201ENSMUST00000104101 131 ntBASIC14.2□□□□□ -0.14
Ube4aE9Q735 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Gm37028-201ENSMUST00000194276 107 ntBASIC14.2□□□□□ -0.14
Ube4aE9Q735 Gm38314-201ENSMUST00000195709 625 ntBASIC14.2□□□□□ -0.14
Ube4aE9Q735 Gm45594-201ENSMUST00000211717 241 ntBASIC14.2□□□□□ -0.14
Ube4aE9Q735 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4aE9Q735 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.19□□□□□ -0.14
Ube4aE9Q735 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.19□□□□□ -0.14
Ube4aE9Q735 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.19□□□□□ -0.14
Ube4aE9Q735 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Gm12247-201ENSMUST00000117585 670 ntBASIC14.19□□□□□ -0.14
Ube4aE9Q735 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Gm3028-201ENSMUST00000213805 1119 ntBASIC14.19□□□□□ -0.14
Ube4aE9Q735 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.19□□□□□ -0.14
Ube4aE9Q735 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.19□□□□□ -0.14
Ube4aE9Q735 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4aE9Q735 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.18□□□□□ -0.14
Ube4aE9Q735 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Gm37859-201ENSMUST00000195529 2173 ntBASIC14.18□□□□□ -0.14
Ube4aE9Q735 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms