Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Gm12857-201ENSMUST00000117678 592 ntBASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Gm38117-201ENSMUST00000194653 939 ntBASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cpsf4lE9Q2N0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Cpsf4lE9Q2N0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cpsf4lE9Q2N0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cpsf4lE9Q2N0 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.02□□□□□ -0.8
Cpsf4lE9Q2N0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cpsf4lE9Q2N0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cpsf4lE9Q2N0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Cpsf4lE9Q2N0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Gm11960-201ENSMUST00000122068 925 ntBASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Gm27552-201ENSMUST00000183351 62 ntBASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Gm27844-201ENSMUST00000183613 62 ntBASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Gm28450-201ENSMUST00000187349 638 ntBASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Gm29199-201ENSMUST00000187766 775 ntBASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cpsf4lE9Q2N0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Cpsf4lE9Q2N0 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms