Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Gm18001-201ENSMUST00000212023 688 ntBASIC10.61□□□□□ -0.71
Sptbn4E9PX29 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sptbn4E9PX29 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sptbn4E9PX29 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sptbn4E9PX29 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sptbn4E9PX29 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sptbn4E9PX29 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Gm25872-201ENSMUST00000177784 100 ntBASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Gm7815-201ENSMUST00000196104 832 ntBASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Gm13426-201ENSMUST00000117887 795 ntBASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Gm5190-201ENSMUST00000192434 357 ntBASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Gm38135-201ENSMUST00000195068 502 ntBASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Gm2566-201ENSMUST00000201267 431 ntBASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Gm6518-201ENSMUST00000208450 342 ntBASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sptbn4E9PX29 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Gm4705-201ENSMUST00000177415 354 ntBASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Gm5808-201ENSMUST00000178090 357 ntBASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Gm43117-201ENSMUST00000198531 379 ntBASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Gm5996-201ENSMUST00000211110 718 ntBASIC10.59□□□□□ -0.71
Sptbn4E9PX29 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.59□□□□□ -0.71
Sptbn4E9PX29 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Gm7701-201ENSMUST00000163185 1479 ntBASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Gm24933-201ENSMUST00000103762 110 ntBASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Gm23252-201ENSMUST00000103776 110 ntBASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Gm10807-201ENSMUST00000177134 795 ntBASIC10.59□□□□□ -0.71
Sptbn4E9PX29 Gm26443-201ENSMUST00000179610 110 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms