Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Gm9353-201ENSMUST00000200472 604 ntBASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Gm12047-201ENSMUST00000117561 944 ntBASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Gm8661-201ENSMUST00000118688 992 ntBASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Gm23694-201ENSMUST00000179335 110 ntBASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Gm44159-201ENSMUST00000204065 442 ntBASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a3E9PWQ3 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Snord23-201ENSMUST00000116828 109 ntBASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm5873-201ENSMUST00000177157 1066 ntBASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm4866-201ENSMUST00000197408 589 ntBASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm9273-201ENSMUST00000200606 715 ntBASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm25343-201ENSMUST00000157460 107 ntBASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm3926-201ENSMUST00000223378 1123 ntBASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm24161-201ENSMUST00000104592 130 ntBASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Mir8104-201ENSMUST00000185165 101 ntBASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a3E9PWQ3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Gm15793-201ENSMUST00000121857 495 ntBASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a3E9PWQ3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms