Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Gm22711-201ENSMUST00000116890 133 ntBASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.75□□□□□ -0.37
Clca3bE9PUL3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Mir7686-201ENSMUST00000200604 57 ntBASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clca3bE9PUL3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gm15566-201ENSMUST00000121130 590 ntBASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gm10051-201ENSMUST00000145209 414 ntBASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gm8459-201ENSMUST00000162504 760 ntBASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Mir6546-201ENSMUST00000184460 62 ntBASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clca3bE9PUL3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.73□□□□□ -0.37
Clca3bE9PUL3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms