Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Rmrp-201ENSMUST00000157463 271 ntBASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Gm25043-201ENSMUST00000158604 212 ntBASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Gm20482-202ENSMUST00000174729 825 ntBASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Gm27320-201ENSMUST00000184892 109 ntBASIC13.03□□□□□ -0.32
Trim30cD3YVI9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim30cD3YVI9 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim30cD3YVI9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim30cD3YVI9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim30cD3YVI9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Trim30cD3YVI9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.02□□□□□ -0.32
Trim30cD3YVI9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim30cD3YVI9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim30cD3YVI9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim30cD3YVI9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim30cD3YVI9 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim30cD3YVI9 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim30cD3YVI9 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim30cD3YVI9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gm22323-201ENSMUST00000103832 109 ntBASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gm13315-201ENSMUST00000120376 991 ntBASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gm14726-201ENSMUST00000120623 896 ntBASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gm31256-201ENSMUST00000194705 506 ntBASIC13.02□□□□□ -0.33
Trim30cD3YVI9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trim30cD3YVI9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Gm11597-201ENSMUST00000121423 964 ntBASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 289.9 ms