Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Usp42B2RQC2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Usp42B2RQC2 Gm45113-201ENSMUST00000207518 165 ntBASIC13.85□□□□□ -0.19
Usp42B2RQC2 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.85□□□□□ -0.19
Usp42B2RQC2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp42B2RQC2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp42B2RQC2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp42B2RQC2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp42B2RQC2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp42B2RQC2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.85□□□□□ -0.19
Usp42B2RQC2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Usp42B2RQC2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.84□□□□□ -0.19
Usp42B2RQC2 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.84□□□□□ -0.19
Usp42B2RQC2 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.84□□□□□ -0.19
Usp42B2RQC2 Rps4l-202ENSMUST00000204242 789 ntBASIC13.84□□□□□ -0.19
Usp42B2RQC2 Gm7848-201ENSMUST00000210739 718 ntBASIC13.84□□□□□ -0.19
Usp42B2RQC2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp42B2RQC2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Usp42B2RQC2 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Usp42B2RQC2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Usp42B2RQC2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Gm7851-201ENSMUST00000117574 323 ntBASIC13.83□□□□□ -0.2
Usp42B2RQC2 Gm23085-201ENSMUST00000157849 293 ntBASIC13.83□□□□□ -0.2
Usp42B2RQC2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Gm10288-201ENSMUST00000084614 537 ntBASIC13.83□□□□□ -0.2
Usp42B2RQC2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp42B2RQC2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp42B2RQC2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms