Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Ptprs-211ENSMUST00000223859 5588 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 Mir7035-201ENSMUST00000184713 82 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm18391-201ENSMUST00000217189 658 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm24231-201ENSMUST00000104315 133 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm22495-201ENSMUST00000104492 126 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 Mir874-201ENSMUST00000104769 76 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm6441-201ENSMUST00000120983 696 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm26976-201ENSMUST00000182929 908 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm8170-201ENSMUST00000218581 945 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.53□□□□□ -0.88
Chd6A3KFM7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Chd6A3KFM7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chd6A3KFM7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Chd6A3KFM7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Chd6A3KFM7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Chd6A3KFM7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chd6A3KFM7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Chd6A3KFM7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chd6A3KFM7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.88
Chd6A3KFM7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chd6A3KFM7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chd6A3KFM7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm44106-201ENSMUST00000203153 1599 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Chd6A3KFM7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC9.52□□□□□ -0.89
Chd6A3KFM7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC9.52□□□□□ -0.89
Chd6A3KFM7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm37582-201ENSMUST00000192953 1409 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms