Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm5380-201ENSMUST00000119296 2136 ntBASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trav8-1A0A075B641 Gm6092-201ENSMUST00000121659 2029 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Gm37954-201ENSMUST00000195400 2071 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Gm10339-203ENSMUST00000225409 1671 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Gm14921-201ENSMUST00000118643 908 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Mir7684-201ENSMUST00000183858 60 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Mir8102-201ENSMUST00000184148 139 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Gm4034-201ENSMUST00000187674 480 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Gm31326-201ENSMUST00000191856 1048 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Gm37935-201ENSMUST00000192012 982 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Gm44069-201ENSMUST00000204898 506 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 AC139382.1-201ENSMUST00000221402 498 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Gm10463-202ENSMUST00000195772 2889 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Trav8-1A0A075B641 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Gm43760-201ENSMUST00000202120 3015 ntBASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Gm21136-201ENSMUST00000186812 2575 ntBASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Gm6605-201ENSMUST00000031488 2574 ntBASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Rims2-204ENSMUST00000226410 3685 ntBASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Trav8-1A0A075B641 AC093022.4-203ENSMUST00000228523 2657 ntBASIC8.46□□□□□ -1.06
Trav8-1A0A075B641 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav8-1A0A075B641 Gm15487-201ENSMUST00000122373 465 ntBASIC8.46□□□□□ -1.06
Trav8-1A0A075B641 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trav8-1A0A075B641 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC8.46□□□□□ -1.06
Trav8-1A0A075B641 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trav8-1A0A075B641 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav8-1A0A075B641 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trav8-1A0A075B641 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trav8-1A0A075B641 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms