Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Gm22018-201ENSMUST00000104357 131 ntBASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Gm4986-201ENSMUST00000119731 549 ntBASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Gm5745-201ENSMUST00000183748 313 ntBASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Gm43433-201ENSMUST00000196573 481 ntBASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.71□□□□□ -0.69
H2afb3S4R1G7 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.71□□□□□ -0.69
H2afb3S4R1G7 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H2afb3S4R1G7 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
H2afb3S4R1G7 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
H2afb3S4R1G7 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
H2afb3S4R1G7 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
H2afb3S4R1G7 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
H2afb3S4R1G7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
H2afb3S4R1G7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
H2afb3S4R1G7 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Gm38241-201ENSMUST00000192641 898 ntBASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H2afb3S4R1G7 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms