Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lgr5Q9Z1P4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lgr5Q9Z1P4 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC14.15□□□□□ -0.14
Lgr5Q9Z1P4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lgr5Q9Z1P4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lgr5Q9Z1P4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lgr5Q9Z1P4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lgr5Q9Z1P4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lgr5Q9Z1P4 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.15□□□□□ -0.14
Lgr5Q9Z1P4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lgr5Q9Z1P4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lgr5Q9Z1P4 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Lgr5Q9Z1P4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Gm11801-201ENSMUST00000117807 746 ntBASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Gm15549-201ENSMUST00000121595 622 ntBASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Gm11960-201ENSMUST00000122068 925 ntBASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Gm25554-201ENSMUST00000158075 113 ntBASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Gm22877-201ENSMUST00000175451 105 ntBASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Gm45758-201ENSMUST00000212448 1006 ntBASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Lgi3-203ENSMUST00000226548 1001 ntBASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lgr5Q9Z1P4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gm12247-201ENSMUST00000117585 670 ntBASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gm14892-201ENSMUST00000117636 267 ntBASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gm14219-201ENSMUST00000120414 288 ntBASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gm15329-201ENSMUST00000121408 155 ntBASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gm11980-201ENSMUST00000121445 986 ntBASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gm8723-201ENSMUST00000166076 820 ntBASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gm8701-201ENSMUST00000169259 874 ntBASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gm7741-201ENSMUST00000181445 989 ntBASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 AC129308.3-201ENSMUST00000225652 524 ntBASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lgr5Q9Z1P4 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lgr5Q9Z1P4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lgr5Q9Z1P4 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lgr5Q9Z1P4 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.12□□□□□ -0.15
Lgr5Q9Z1P4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lgr5Q9Z1P4 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms