Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.3□□□□□ -0.6
Lhx9Q9WUH2 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Gm15004-201ENSMUST00000119192 630 ntBASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Gm9192-201ENSMUST00000183221 985 ntBASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Gm8956-201ENSMUST00000203939 825 ntBASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Ginm1-202ENSMUST00000065124 300 ntBASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lhx9Q9WUH2 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Gm44126-201ENSMUST00000204831 514 ntBASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Lhx9Q9WUH2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms