Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.89□□□□□ -0.51
Scn8aQ9WTU3 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Gm15131-201ENSMUST00000119124 595 ntBASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Gm11700-201ENSMUST00000119409 403 ntBASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Gm11956-201ENSMUST00000119525 512 ntBASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Gm16071-201ENSMUST00000119589 793 ntBASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Gm22138-201ENSMUST00000158748 128 ntBASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Gm17826-201ENSMUST00000189720 798 ntBASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn8aQ9WTU3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gm23272-201ENSMUST00000104053 129 ntBASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gm12899-201ENSMUST00000120565 551 ntBASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gm45550-201ENSMUST00000209380 946 ntBASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gm18065-201ENSMUST00000221395 526 ntBASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms