Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sec61a2Q9JLR1 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gm15547-201ENSMUST00000122152 333 ntBASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gm10312-201ENSMUST00000078515 489 ntBASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sec61a2Q9JLR1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Rprl1-201ENSMUST00000158050 327 ntBASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms