Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Mir671-201ENSMUST00000102432 98 ntBASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Gm37284-201ENSMUST00000193607 539 ntBASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Cacna1fQ9JIS7 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Mt1-202ENSMUST00000211807 1085 ntBASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1fQ9JIS7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Gm13549-201ENSMUST00000118339 796 ntBASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Gm15617-201ENSMUST00000118973 771 ntBASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Gm16219-201ENSMUST00000120096 274 ntBASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Gm26272-201ENSMUST00000179241 132 ntBASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Gm5298-201ENSMUST00000201122 892 ntBASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.29□□□□□ -0.28
Cacna1fQ9JIS7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms