Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.46□□□□□ -0.89
Smco4Q9JIS3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Gm14921-201ENSMUST00000118643 908 ntBASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Gm29541-201ENSMUST00000191351 678 ntBASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC9.46□□□□□ -0.9
Smco4Q9JIS3 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco4Q9JIS3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Gm16478-201ENSMUST00000208113 5084 ntBASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Gm24231-201ENSMUST00000104315 133 ntBASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.45□□□□□ -0.9
Smco4Q9JIS3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smco4Q9JIS3 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms