Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm12628-201ENSMUST00000122193 382 ntBASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Gm24844-201ENSMUST00000158679 127 ntBASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Gm10731-201ENSMUST00000181171 448 ntBASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.66□□□□□ -0.54
Rrp8Q9DB85 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.66□□□□□ -0.54
Rrp8Q9DB85 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.66□□□□□ -0.54
Rrp8Q9DB85 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.66□□□□□ -0.54
Rrp8Q9DB85 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.66□□□□□ -0.54
Rrp8Q9DB85 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Gm25076-201ENSMUST00000104098 132 ntBASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Gm3150-201ENSMUST00000166418 204 ntBASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Gm6407-201ENSMUST00000176468 549 ntBASIC11.65□□□□□ -0.54
Rrp8Q9DB85 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Gm5298-201ENSMUST00000201122 892 ntBASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Gm17931-201ENSMUST00000208132 634 ntBASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Gm19009-201ENSMUST00000223072 823 ntBASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.65□□□□□ -0.54
Rrp8Q9DB85 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.65□□□□□ -0.54
Rrp8Q9DB85 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.65□□□□□ -0.55
Rrp8Q9DB85 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rrp8Q9DB85 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Rrp8Q9DB85 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.65□□□□□ -0.55
Rrp8Q9DB85 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Gm7150-201ENSMUST00000122032 981 ntBASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Gm26047-201ENSMUST00000157308 113 ntBASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Gm24398-201ENSMUST00000157870 109 ntBASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Gm26047-202ENSMUST00000198840 115 ntBASIC11.64□□□□□ -0.55
Rrp8Q9DB85 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms